Here is the entirety of what is in the log file: I tried opening a file and this is what came out (below) - it looks like a configuration issue? -Liz
J-Express version: J-Express 2012 Build 119. March 12. 2012
System properties
java.runtime.name - Java(TM) SE Runtime Environment
sun.boot.library.path - C:\Program Files\Java\jre1.8.0_31\bin
java.vm.version - 25.31-b07
java.vm.vendor - Oracle Corporation
java.vendor.url -
http://java.oracle.com/path.separator - ;
java.vm.name - Java HotSpot(TM) 64-Bit Server VM
file.encoding.pkg - sun.io
user.country - US
user.script -
sun.java.launcher - SUN_STANDARD
sun.os.patch.level -
java.vm.specification.name - Java Virtual Machine Specification
user.dir - C:\Users\Liz\Documents\J-express
java.runtime.version - 1.8.0_31-b13
java.awt.graphicsenv - sun.awt.Win32GraphicsEnvironment
java.endorsed.dirs - C:\Program Files\Java\jre1.8.0_31\lib\endorsed
os.arch - amd64
java.io.tmpdir - C:\Users\Liz\AppData\Local\Temp\
line.separator -
java.vm.specification.vendor - Oracle Corporation
user.variant -
os.name - Windows 8.1
sun.jnu.encoding - Cp1252
java.library.path - C:\Program Files\Java\jre1.8.0_31\bin;C:\WINDOWS\Sun\Java\bin;C:\WINDOWS\system32;C:\WINDOWS;C:\ProgramData\Oracle\Java\javapath;C:\Program Files (x86)\Intel\iCLS Client\;C:\Program Files\Intel\iCLS Client\;C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem;C:\WINDOWS\System32\WindowsPowerShell\v1.0\;C:\Program Files\Intel\Intel(R) Management Engine Components\DAL;C:\Program Files\Intel\Intel(R) Management Engine Components\IPT;C:\Program Files (x86)\Intel\Intel(R) Management Engine Components\DAL;C:\Program Files (x86)\Intel\Intel(R) Management Engine Components\IPT;C:\Program Files (x86)\Intel\OpenCL SDK\2.0\bin\x86;C:\Program Files (x86)\Intel\OpenCL SDK\2.0\bin\x64;C:\Program Files\Intel\WiFi\bin\;C:\Program Files\Common Files\Intel\WirelessCommon\;C:\PROGRA~2\TABLEC~1.01;C:\Program Files (x86)\Common Files\Adobe\AGL;C:\Program Files\Calibre2\;C:\Program Files\SASHome\Secure;C:\Program Files\SASHome\x86\Secure;C:\Strawberry\c\bin;C:\Strawberry\perl\site\bin;C:\Strawberry\perl\bin;C:\Program Files (x86)\Skype\Phone\;C:\Program Files\SASHome\Secure\ccme4;C:\Program Files\SASHome\x86\Secure\ccme4;C:\Program Files\NCBI\blast-2.2.29+\bin;.
sun.awt.enableExtraMouseButtons - true
java.specification.name - Java Platform API Specification
java.class.version - 52.0
sun.management.compiler - HotSpot 64-Bit Tiered Compilers
os.version - 6.3
user.home - C:\Users\Liz
user.timezone - America/New_York
java.awt.printerjob - sun.awt.windows.WPrinterJob
file.encoding - Cp1252
java.specification.version - 1.8
java.class.path - C:\Users\Liz\Documents\J-express\;C:\Users\Liz\Documents\J-express\lib\edtftpj.jar;C:\Users\Liz\Documents\J-express\lib\freehep-export-2.1.2.jar;C:\Users\Liz\Documents\J-express\lib\freehep-graphics2d-2.1.1.jar;C:\Users\Liz\Documents\J-express\lib\freehep-graphics2d-2.1.2.jar;C:\Users\Liz\Documents\J-express\lib\freehep-graphicsio-2.1.2.jar;C:\Users\Liz\Documents\J-express\lib\freehep-graphicsio-emf-2.1.2.jar;C:\Users\Liz\Documents\J-express\lib\freehep-graphicsio-pdf-2.1.2.jar;C:\Users\Liz\Documents\J-express\lib\freehep-graphicsio-ps-2.1.2.jar;C:\Users\Liz\Documents\J-express\lib\freehep-graphicsio-svg-2.1.2.jar;C:\Users\Liz\Documents\J-express\lib\freehep-graphicsio-swf-2.1.2.jar;C:\Users\Liz\Documents\J-express\lib\freehep-io-2.0.3.jar;C:\Users\Liz\Documents\J-express\lib\freehep-swing-2.0.3.jar;C:\Users\Liz\Documents\J-express\lib\freehep-swing-2.0.4-SNAPSHOT.jar;C:\Users\Liz\Documents\J-express\lib\freehep-util-2.0.3.jar;C:\Users\Liz\Documents\J-express\lib\freehep-xml-2.1.1.jar;C:\Users\Liz\Documents\J-express\lib\freehep-xml-2.1.3-SNAPSHOT.jar;C:\Users\Liz\Documents\J-express\lib\Help.jar;C:\Users\Liz\Documents\J-express\lib\iText.jar;C:\Users\Liz\Documents\J-express\lib\jai_codec.jar;C:\Users\Liz\Documents\J-express\lib\jai_core.jar;C:\Users\Liz\Documents\J-express\lib\jas-plotter-2.2.jar;C:\Users\Liz\Documents\J-express\lib\jcalendar-1.3.2.jar;C:\Users\Liz\Documents\J-express\lib\jcommon-1.0.16.jar;C:\Users\Liz\Documents\J-express\lib\jdom-1.0.jar;C:\Users\Liz\Documents\J-express\lib\jdom.jar;C:\Users\Liz\Documents\J-express\lib\jexpress.jar;C:\Users\Liz\Documents\J-express\lib\jexpressServer.jar;C:\Users\Liz\Documents\J-express\lib\jfreechart-1.0.13.jar;C:\Users\Liz\Documents\J-express\lib\jh.jar;C:\Users\Liz\Documents\J-express\lib\jmathplot.jar;C:\Users\Liz\Documents\J-express\lib\js.jar;C:\Users\Liz\Documents\J-express\lib\jsci-core.jar;C:\Users\Liz\Documents\J-express\lib\jsci.jar;C:\Users\Liz\Documents\J-express\lib\junit.jar;C:\Users\Liz\Documents\J-express\lib\jylib.jar;C:\Users\Liz\Documents\J-express\lib\jython.jar;C:\Users\Liz\Documents\J-express\lib\MAGEHandler.jar;C:\Users\Liz\Documents\J-express\lib\MAGEMLimport.jar;C:\Users\Liz\Documents\J-express\lib\MAGEstk-2004-06-29-v1.1-compatible.jar;C:\Users\Liz\Documents\J-express\lib\mlibwrapper_jai.jar;C:\Users\Liz\Documents\J-express\lib\openide-lookup-1.9-patched-1.0.jar;C:\Users\Liz\Documents\J-express\lib\servlet.jar;C:\Users\Liz\Documents\J-express\lib\swing-layout.jar;C:\Users\Liz\Documents\J-express\;plugins\stat.jar
user.name - Liz
java.vm.specification.version - 1.8
sun.java.command - jexpress.jexpress
java.home - C:\Program Files\Java\jre1.8.0_31
sun.arch.data.model - 64
user.language - en
java.specification.vendor - Oracle Corporation
awt.toolkit - sun.awt.windows.WToolkit
java.vm.info - mixed mode
java.version - 1.8.0_31
java.ext.dirs - C:\Program Files\Java\jre1.8.0_31\lib\ext;C:\WINDOWS\Sun\Java\lib\ext
sun.boot.class.path - C:\Program Files\Java\jre1.8.0_31\lib\resources.jar;C:\Program Files\Java\jre1.8.0_31\lib\rt.jar;C:\Program Files\Java\jre1.8.0_31\lib\sunrsasign.jar;C:\Program Files\Java\jre1.8.0_31\lib\jsse.jar;C:\Program Files\Java\jre1.8.0_31\lib\jce.jar;C:\Program Files\Java\jre1.8.0_31\lib\charsets.jar;C:\Program Files\Java\jre1.8.0_31\lib\jfr.jar;C:\Program Files\Java\jre1.8.0_31\classes
java.vendor - Oracle Corporation
file.separator - \
java.vendor.url.bug -
http://bugreport.sun.com/bugreport/sun.io.unicode.encoding - UnicodeLittle
sun.cpu.endian - little
sun.desktop - windows
sun.cpu.isalist - amd64
File SystemJ-Express file system -- File locations
Settings file does not exist..
Used Paths:
User path: C:\Users\Liz\Documents\J-express
User data path: C:\Users\Liz\Documents\J-express\data
Annotation path: C:\Users\Liz\Documents\J-express\resources\Annotation
Sequence path: C:\Users\Liz\Documents\J-express\resources\SEQUENCE
GO path: C:\Users\Liz\Documents\J-express\resources\GO
PLUGIN path: C:\Users\Liz\Documents\J-express\resources\PLUGINS
Libraries path: C:\Users\Liz\Documents\J-express\lib
Pathways path: C:\Users\Liz\Documents\J-express\resources\PW
Settings file: C:\Users\Liz\Documents\J-express\jexpress.cfg
Spotpix path: C:\Users\Liz\Documents\J-express\resources\EXPERIMENTS
VM memory use min (MB): 256
VM memory use max (MB): 512
File system out done
Looking for license file in C:\Users\Liz\Documents\J-express
Looking for settings at C:\Users\Liz\Documents\J-express\jexpress.cfg
Exception in thread "AWT-EventQueue-0" java.lang.NullPointerException
at jexpress.cluster.addRecentFile(cluster.java:1222)
at expresscomponents.filehandler.loadProjectNEW(filehandler.java:1096)
at jexpress.cluster.actionPerformed(cluster.java:2673)
at javax.swing.AbstractButton.fireActionPerformed(Unknown Source)
at javax.swing.AbstractButton$Handler.actionPerformed(Unknown Source)
at javax.swing.DefaultButtonModel.fireActionPerformed(Unknown Source)
at javax.swing.DefaultButtonModel.setPressed(Unknown Source)
at javax.swing.plaf.basic.BasicButtonListener.mouseReleased(Unknown Source)
at java.awt.Component.processMouseEvent(Unknown Source)
at javax.swing.JComponent.processMouseEvent(Unknown Source)
at java.awt.Component.processEvent(Unknown Source)
at java.awt.Container.processEvent(Unknown Source)
at java.awt.Component.dispatchEventImpl(Unknown Source)
at java.awt.Container.dispatchEventImpl(Unknown Source)
at java.awt.Component.dispatchEvent(Unknown Source)
at java.awt.LightweightDispatcher.retargetMouseEvent(Unknown Source)
at java.awt.LightweightDispatcher.processMouseEvent(Unknown Source)
at java.awt.LightweightDispatcher.dispatchEvent(Unknown Source)
at java.awt.Container.dispatchEventImpl(Unknown Source)
at java.awt.Window.dispatchEventImpl(Unknown Source)
at java.awt.Component.dispatchEvent(Unknown Source)
at java.awt.EventQueue.dispatchEventImpl(Unknown Source)
at java.awt.EventQueue.access$500(Unknown Source)
at java.awt.EventQueue$3.run(Unknown Source)
at java.awt.EventQueue$3.run(Unknown Source)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source)
at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source)
at java.awt.EventQueue$4.run(Unknown Source)
at java.awt.EventQueue$4.run(Unknown Source)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source)
at java.awt.EventQueue.dispatchEvent(Unknown Source)
at java.awt.EventDispatchThread.pumpOneEventForFilters(Unknown Source)
at java.awt.EventDispatchThread.pumpEventsForFilter(Unknown Source)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source)
at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
at java.awt.EventDispatchThread.run(Unknown Source)
No infosNew Project